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Träfflista för sökning "WFRF:(Tyrer JP) ;pers:(Tomlinson I);pers:(Pharoah PDP)"

Search: WFRF:(Tyrer JP) > Tomlinson I > Pharoah PDP

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  • Dennis, J, et al. (author)
  • Rare germline copy number variants (CNVs) and breast cancer risk
  • 2022
  • In: Communications biology. - : Springer Science and Business Media LLC. - 2399-3642. ; 5:1, s. 65-
  • Journal article (peer-reviewed)abstract
    • Germline copy number variants (CNVs) are pervasive in the human genome but potential disease associations with rare CNVs have not been comprehensively assessed in large datasets. We analysed rare CNVs in genes and non-coding regions for 86,788 breast cancer cases and 76,122 controls of European ancestry with genome-wide array data. Gene burden tests detected the strongest association for deletions in BRCA1 (P = 3.7E−18). Nine other genes were associated with a p-value < 0.01 including known susceptibility genes CHEK2 (P = 0.0008), ATM (P = 0.002) and BRCA2 (P = 0.008). Outside the known genes we detected associations with p-values < 0.001 for either overall or subtype-specific breast cancer at nine deletion regions and four duplication regions. Three of the deletion regions were in established common susceptibility loci. To the best of our knowledge, this is the first genome-wide analysis of rare CNVs in a large breast cancer case-control dataset. We detected associations with exonic deletions in established breast cancer susceptibility genes. We also detected suggestive associations with non-coding CNVs in known and novel loci with large effects sizes. Larger sample sizes will be required to reach robust levels of statistical significance.
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  • O'Mara, TA, et al. (author)
  • Identification of nine new susceptibility loci for endometrial cancer
  • 2018
  • In: Nature communications. - : Springer Science and Business Media LLC. - 2041-1723. ; 9:1, s. 3166-
  • Journal article (peer-reviewed)abstract
    • Endometrial cancer is the most commonly diagnosed cancer of the female reproductive tract in developed countries. Through genome-wide association studies (GWAS), we have previously identified eight risk loci for endometrial cancer. Here, we present an expanded meta-analysis of 12,906 endometrial cancer cases and 108,979 controls (including new genotype data for 5624 cases) and identify nine novel genome-wide significant loci, including a locus on 12q24.12 previously identified by meta-GWAS of endometrial and colorectal cancer. At five loci, expression quantitative trait locus (eQTL) analyses identify candidate causal genes; risk alleles at two of these loci associate with decreased expression of genes, which encode negative regulators of oncogenic signal transduction proteins (SH2B3 (12q24.12) and NF1 (17q11.2)). In summary, this study has doubled the number of known endometrial cancer risk loci and revealed candidate causal genes for future study.
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  • Result 1-10 of 12
Type of publication
journal article (12)
Type of content
peer-reviewed (12)
Author/Editor
Brenner, H (12)
Dennis, J (12)
Hall, P (12)
Czene, K (12)
Michailidou, K (12)
Bolla, MK (12)
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Hopper, JL (12)
Dunning, AM (12)
Fasching, PA (12)
Cox, A (12)
Couch, FJ (12)
Lambrechts, D (12)
Chang-Claude, J (12)
Easton, DF (12)
Tyrer, JP (12)
Wang, Q. (11)
Lindblom, A (11)
Giles, GG (11)
Brauch, H (11)
Shah, M (11)
Beckmann, MW (11)
Burwinkel, B (11)
Dork, T (11)
Swerdlow, AJ (11)
Hillemanns, P (11)
Kristensen, VN (11)
Peto, J (10)
Spurdle, AB (10)
Meindl, A (10)
Scott, RJ (10)
Ekici, AB (9)
Healey, CS (9)
Goode, EL (9)
Thompson, DJ (9)
Hein, A (9)
Martin, L (8)
Mints, M (8)
Amant, F (8)
Tham, E. (8)
Gorman, M (8)
Fridley, BL (8)
Durst, M (8)
Runnebaum, I (8)
Trovik, J (8)
O'Mara, TA (8)
Dowdy, SC (8)
Werner, HMJ (8)
Otton, G (8)
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University
Karolinska Institutet (12)
Lund University (5)
Uppsala University (4)
Umeå University (1)
Language
English (12)
Research subject (UKÄ/SCB)
Medical and Health Sciences (5)

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